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Series GSE228402 Query DataSets for GSE228402
Status Public on Nov 22, 2023
Title Selective compartmentalization in condensin-depleted mitotic chromosomes
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://www.biorxiv.org/content/10.1101/2023.11.09.566494v1
 
Citation(s) 38014261
Submission date Mar 28, 2023
Last update date Dec 14, 2023
Contact name Haoyue Zhang
E-mail(s) zhang_adam@szbl.ac.cn
Organization name Shenzhen Bay Lab
Street address Gaoke Innovation Center, Guangqiao Road, Guangming District, Shenzhen
City Shenzhen
ZIP/Postal code 518107
Country China
 
Platforms (3)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL28330 DNBSEQ-T7 (Mus musculus)
Samples (146)
GSM7108989 HP1a_b_tir2_1h_no_a_no_d_rep1
GSM7108990 HP1a_b_tir2_1h_no_a_no_d_rep2
GSM7108991 HP1a_b_tir2_1h_no_a_with_d_rep1
This SuperSeries is composed of the following SubSeries:
GSE227816 Selective compartmentalization in condensin-depleted mitotic chromosomes [Hi-C I]
GSE228160 Selective compartmentalization in condensin-depleted mitotic chromosomes [ChIP-seq]
GSE228395 Selective compartmentalization in condensin-depleted mitotic chromosomes [HiC-C]
Relations
BioProject PRJNA949625

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228402_RAW.tar 128.6 Gb (http)(custom) TAR (of BW, COOL, HIC)
SRA Run SelectorHelp
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