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Series GSE227604 Query DataSets for GSE227604
Status Public on Apr 03, 2024
Title Linking CRISPR/Cas9 double-strand break profiles to gene editing precision with BreakTag [indels]
Organism Homo sapiens
Experiment type Other
Summary Here we developed BreakTag, a versatile, highly parallel and scissile-aware methodology for the profiling of Cas9-induced DNA double strand break (DSBs), to identify molecular determinants influencing Cas9 incisions
 
Overall design Characterization of indels following Cas9-induced breaks in selected amplicons containing a SNP in the protospacer.
 
Contributor(s) Longo GM, Sayols S, Roukos V
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Submission date Mar 17, 2023
Last update date Apr 05, 2024
Contact name Sergi Sayols
Organization name Institute of Molecular Biology, Mainz
Street address Ackermannweg 4
City Mainz
ZIP/Postal code 55128
Country Germany
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (40)
GSM7103835 S_CH_REF_pos17
GSM7103836 M_AJ_ALT_pos17
GSM7103837 S_CH_REF_pos18
This SubSeries is part of SuperSeries:
GSE223772 Linking CRISPR/Cas9 double-strand break profiles to gene editing precision with BreakTag
Relations
BioProject PRJNA945887

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227604_RAW.tar 1.1 Mb (http)(custom) TAR (of TAR, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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