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Series GSE227183 Query DataSets for GSE227183
Status Public on Oct 23, 2023
Title Topoisomerase 1 facilitates nucleosome reassembly at stress genes during recovery [RNA-seq]
Organism Schizosaccharomyces pombe
Experiment type Expression profiling by high throughput sequencing
Summary Investigate the role of topoisomerase 1 in the response to oxidative stress
Overall design Gene expression profiling using RNA-seq obtained from a wild-type and a top1 deleted strain under untreated conditions and after 30 minutes of 1mM peroxide treatment
Contributor(s) Vega M, Fraile R, de Castro Cogle K, Castillo D, Anglada R, Casals F, Ayté J, Lowy-Gallego E, Hidalgo E
Citation(s) 37956308
Submission date Mar 12, 2023
Last update date Jan 31, 2024
Contact name Montserrat Vega
Organization name Universitat Pompeu Fabra
Department MELIS
Street address C/ Dr. Aiguader 88, lab 383
City Barcelona
State/province Barcelona
ZIP/Postal code 08003
Country Spain
Platforms (1)
GPL13988 Illumina HiSeq 2000 (Schizosaccharomyces pombe)
Samples (8)
GSM7092829 WT_untreated_rep1 [RNA-seq]
GSM7092830 WT_untreated_rep2 [RNA-seq]
GSM7092831 WT_treated_rep1 [RNA-seq]
This SubSeries is part of SuperSeries:
GSE227184 Topoisomerase 1 facilitates nucleosome reassembly at stress genes during recovery.
BioProject PRJNA943528

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227183_DESeqNormalizedCounts.txt.gz 273.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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