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Series GSE227064 Query DataSets for GSE227064
Status Public on Feb 19, 2024
Title Lipocalin-2 expression identifies an immuno-regulatory intestinal neutrophil population during GVHD
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Acute graft-versus-host disease (aGVHD) is a life-threatening complication of allogeneic hematopoietic cell transplantation (allo-HCT). Strategies to promote intestinal tissue tolerance during aGVHD may improve patient outcomes. Using single-cell RNA-sequencing, we identified a Lipocalin-2 (LCN2)-expressing neutrophil population in mice with intestinal aGVHD. Transfer of LCN2-overexpressing neutrophils or treatment with recombinant LCN2 reduced aGVHD-severity, while the lack of epithelial or hematopoietic LCN2 enhanced aGVHD severity and caused microbiome alterations. Mechanistically, LCN2 induced IGF-1R signaling in macrophages via the LCN2 receptor Slc22A17, which increased IL-10 production while reducing MHC-II expression. Transfer of LCN2-pretreated macrophages reduced aGVHD severity. LCN2-treatment did not reduce graft-versus-leukemia effects. In aGVHD patients LCN2 expression correlated with IL-10 expression in intestinal biopsies. We identified a novel intestinal LCN2+ neutrophil population that reduces aGVHD-severity by decreasing MHC-II expression while increasing IL-10 production in macrophages. Administration of LCN2 presents a novel approach against aGVHD to be tested in clinical trials.
 
Overall design Single-cell RNA sequencing was performed on neutrophils (CD45+H2kb+CD11b+Ly6G+) residing in the terminal ileum on day 21 after allogeneic hematopoietic cell transplantation. BALB/c mice receiving 5 x 10ˆ6 BM cells with 4 x 10ˆ5 T cells from C57BL/6 donor mice developed acute GVHD, while BALB/c mice receiving only 5 x 10ˆ6 BM cells from C57BL/6 serve as a control.
 
Contributor(s) Peltokangas N, Grün D, Hülsdünker J, Zeiser R
Citation(s) 38381845
Submission date Mar 09, 2023
Last update date Jun 17, 2024
Contact name Nina Peltokangas
E-mail(s) peltokangas@ie-freiburg.mpg.de
Organization name Max Planck Institute of Immunobiology and Epigenetics
Street address Stübeweg 51
City Freiburg
ZIP/Postal code 79108
Country Germany
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (22)
GSM7090962 BM-081018-N1
GSM7090963 BM-081018-N2
GSM7090964 BM-081018-N3
Relations
BioProject PRJNA943060

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227064_RAW.tar 4.2 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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