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Series GSE225987 Query DataSets for GSE225987
Status Public on May 31, 2023
Title Abcg2 expressing VESC in adult heart
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Abcg2 expressing vascular endothelial stem cells (AbcVESC) in adult murine heart promote vessel regeneration after cardiac infarction injury. Here we compared H3.3 K4Me3, K27Me3 modifications between AbcVESC and mature EC
 
Overall design AbcVESC in adult Abcg2creERT;ROSATdtomato (Abcg2TT) mice were labeled by TdTomato 1 day after 50mg/kg tamoxifen injection. H3.3 K4Me3, K27Me3 CHIP-Seq were performed in TdTomato+ AbcVESC and TdTomato- mature EC from adult Abcg2TT mouse heart.
 
Contributor(s) Lin Y, Gil C, Banno K, Liu Y, Rafii S, Yoder MC
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 23, 2023
Last update date Jun 02, 2023
Contact name Yang Lin
Organization name Weill Cornell Medicine
Street address 455 Main Street 06W
City New York
State/province NY
ZIP/Postal code 10044
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM7061338 ECh_Abcg2P_input_1_052721
GSM7061339 ECh_Abcg2P_input_2_052721
GSM7061340 ECh_Abcg2P_K4me3_1_052721
Relations
BioProject PRJNA938150

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE225987_RAW.tar 879.9 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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