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Series GSE22586 Query DataSets for GSE22586
Status Public on Oct 01, 2010
Title The forced loss of Epstein Barr virus from Burkitt's lymphoma cells: uncomplemented cells vs BART miRNA complemented cells.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transcriptional profiling of Burkitt lymphoma cells engineered to inducibly express dominant negative EBNA1 (dnEBNA1), which forces the loss of Epstein Barr virus (EBV). Profiles are made of cells in which all of EBV is lost (dnEBNA1 on) or all of EBV except the BART miRNAs is lost (dnEBNA1 on, BART miRNAs ectopically expressed).
Overall design This is a 2-condition experiment: uncomplemented cells (EBV evicted with dnEBNA1), and BART-complemented cells (EBV evicted with dnEBNA1, BART miRNAs expressed ectopically). There are 3 biological replicates for each condition.
Contributor(s) Vereide DT, Sugden B
Citation(s) 23503461
Submission date Jun 26, 2010
Last update date Feb 22, 2018
Contact name Bill Sugden
Phone 608-262-6697
Organization name University of Wisconsin-Madison
Department Oncology
Street address 1400 University Avenue
City Madison
State/province WI
ZIP/Postal code 53706-1599
Country USA
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (6)
GSM560518 Uncomplemented cells, replicate 1
GSM560519 Uncomplemented cells, replicate 2
GSM560520 Uncomplemented cells, replicate 3
BioProject PRJNA128395

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22586_RAW.tar 91.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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