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Series GSE225271 Query DataSets for GSE225271
Status Public on May 09, 2023
Title Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse Protamine 1
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary Conventional dogma presumes that protamine-mediated DNA compaction in sperm is achieved by electrostatic interactions between DNA and the arginine-rich core of protamines. However, phylogenetic analysis reveals several non-arginine residues conserved within, but not across species. The significance of these residues or post-translational modifications are poorly understood. Here, we investigated the functional role of K49, a rodent-specific lysine residue in mouse protamine 1 (P1) that is acetylated early in spermiogenesis and retained in sperm. In vivo, alanine substitution (P1 K49A) results in loss of programmatic histone retention, decreased sperm motility, decreased male fertility, and in zygotes, premature P1 removal from paternal chromatin, altered DNA replication, and embryonic arrest. In vitro, P1 K49A decreases protamine-DNA binding and alters DNA compaction/decompaction kinetics. Hence, a single amino acid substitution outside the P1 arginine core is sufficient to profoundly alter protein function and developmental outcomes, suggesting that protamine non-arginine residues are essential for reproductive fitness.
 
Overall design Refer to individual Series
Web link https://www.nature.com/articles/s41594-023-01033-4
 
Citation(s) 37460896
Submission date Feb 14, 2023
Last update date Aug 08, 2023
Contact name Qianyi Ma
E-mail(s) qzm100@gmail.com
Organization name University of Michigan
Department Human Genetics
Street address 1141 E Catherine St
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (54)
GSM7043012 WT-MNASE-1
GSM7043013 MT-MNASE-1
GSM7043014 WT-MNASE-2
This SuperSeries is composed of the following SubSeries:
GSE225268 Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse Protamine 1 [MNase-Seq]
GSE225270 Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse Protamine 1 [scRNA-Seq]
Relations
BioProject PRJNA934862

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE225271_RAW.tar 2.0 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp

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