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Series GSE224947 Query DataSets for GSE224947
Status Public on Jul 13, 2023
Title The role of stromal and immune cells in atrial disease [II]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In atrial fibrillation, disturbed electrical conduction disrupts the coordinated contraction of the heart’s antechambers, increasing the risk of stroke and heart failure. The rising prevalence of this disease approaches 9% in patients >65 years. Studying freshly isolated human atrial tissue and a new mouse model, we here decipher how immune and stromal cells contribute to the structural tissue remodeling that underlies atrial fibrillation. Single-cell transcriptomes from control and diseased human atria documented macrophage doubling at the expense of endothelial and mural cells. An inflammatory monocyte and a pro-fibrotic SPP1+ macrophage cluster expanded in patients with atrial fibrillation. To experimentally perturb pathways observed in patients, we matched their risk factors Hypertension, Obesity and Mitral valvE Regurgitation (HOMER) in mice. Atrial single-cell transcriptomes obtained in HOMER mice, which developed enlarged, fibrillation-prone atria, recapitulated human cell composition and transcriptome variations. Recruitment drove the expansion of atrial macrophages; accordingly, inhibition of monocyte migration reduced arrhythmia in Ccr2-/- HOMER mice. Deleting Spp1 established macrophage-derived osteopontin as a pleiotropic signal that promotes atrial fibrillation through pro-fibrotic, inflammatory crosstalk with an arsenal of local immune and stromal cells. Taken together, we identify SPP1+ macrophages as targets for immunomodulatory therapy in atrial fibrillation.
 
Overall design Single-cell mRNA sequencing was used to investigate the transcriptomic differences between non-cardiomyocytes FACS-purified from left atrial tissues collected from 2 C57BL/6 bone marrow transplanted (BMT) and 2 Spp1-/- BMT mice exposed to Hypertension, Obesity and Mitral valvE Regurgitation (HOMER).
Web link https://www.science.org/doi/10.1126/science.abq3061
 
Contributor(s) Hulsmans M, Schloss MJ, Lee I, Naxerova K, Nahrendorf M
Citation(s) 37440641, 39149373
Submission date Feb 09, 2023
Last update date Sep 12, 2024
Contact name I-Hsiu Lee
Organization name Mass General Hospital/Harvard University
Department Center for Systems Biology
Street address 185 Cambridge Street
City Boston
State/province Massachusetts
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM7036067 Mouse_C57BL/6_BMT_HOMER_1
GSM7036068 Mouse_C57BL/6_BMT_HOMER_2
GSM7036069 Mouse_Spp1-/-_BMT_HOMER_1
This SubSeries is part of SuperSeries:
GSE224959 The role of stromal and immune cells in atrial disease
Relations
BioProject PRJNA933166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224947_RAW.tar 327.9 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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