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Series GSE224797 Query DataSets for GSE224797
Status Public on Sep 21, 2023
Title Genome wide assessment of gene expression in alpha and beta cells from lean and obese mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the assessment of transcriptome by RNA-Seq of FACS purified Ins1-H2bmCherry purified primary mouse beta cells and Gcg-CreERT2 x YFP positive alpha cells of obese (ob/ob) mice compared to lean littermate controls
Overall design Examination of transcriptomes in primary alpha and beta cells in lean vs obob beta cells by RNA-Seq. Islets from 5 lean males, 5 lean females, 2 ob/ob males and 3 ob/ob females between 35-38 weeks of age.
Contributor(s) Huang JL, Mawla AM, Huising MO
Citation(s) 37606041
Submission date Feb 08, 2023
Last update date Sep 22, 2023
Contact name Mark O. Huising
Organization name University of California, Davis
Department Neurobiology, Physiology and Behavior
Lab Huising lab
Street address One Shields Avenue
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (30)
GSM7032522 lean_alpha, biological replicate 1 (RNA-seq)
GSM7032523 lean_beta, biological replicate 1 (RNA-seq)
GSM7032524 lean_alpha, biological replicate 2 (RNA-seq)
This SubSeries is part of SuperSeries:
GSE224798 Genome wide assessment alpha and beta cells from lean and obese mice
BioProject PRJNA934523

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224797_RAW.tar 74.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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