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Series GSE224666 Query DataSets for GSE224666
Status Public on Sep 29, 2023
Title Genome-wide maps of chromatin state changes in bone marrow derived macrophages (BMDMs) isolated from Baf60a KO or WT mice
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Bone marrow cells from Baf60a KO or WT mice were differentiated into BMDMs and treated with or without oxLDL for 48h.

 
Overall design Quantification of BRG1 binding peak in Baf60a KO and WT BMDMs using ChIPseq.
 
Contributor(s) Zhao Y, Zhang J, Chen E
Citation(s) 37768825
Submission date Feb 06, 2023
Last update date Dec 29, 2023
Contact name Yang Zhao
E-mail(s) ypharan@umich.edu
Organization name University of Michigan
Street address 2800 Plymouth Rd
City Ann Arbor
ZIP/Postal code 48105
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (5)
GSM7029323 ChIP-Seq Input
GSM7029324 ChIP-Seq WT
GSM7029325 ChIP-Seq KO
This SubSeries is part of SuperSeries:
GSE224668 Myeloid BAF60a Deficiency Alters Metabolic Homeostasis and Exacerbates Atherosclerosis
Relations
BioProject PRJNA934489

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224666_RAW.tar 270.0 Kb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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