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Series GSE224525 Query DataSets for GSE224525
Status Public on Aug 13, 2023
Title ERO1A drives immunosuppression and attenuates response to immune checkpoint blockade
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Immunophenotyping of tumor microenvironment (TME) is crucial for immunotherapy efficacy in patients with solid tumours. However, strategies to characterize TME are largely limited with huge heterogeneity. We show that endoplasmic reticular oxidoreductase-1α (ERO1A) induces an immune-suppressive TME and resistance to PD-1 blockade by promoting endoplasmic reticulum (ER) stress response. Single-cell RNA sequencing analyses confirm that ERO1A is correlated with immunosuppression and dysfunction of CD8+ T cell along anti-PD-1 treatment. Ablation of Ero1a in tumours promotes the infiltration of lymphocytes as well as cytotoxicity of CD8+ T cells and enhances response to anti-PD-1 treatment in mouse models.
 
Overall design To dissect the cellular and molecular changes of the TME during immunotherapy, we performed scRNA-seq analyses of tumours from wild type mice (n=5) and Ero1a KO mice (n=5).
 
Contributor(s) Liu L, Pan X, Wang J
Citation(s) 37769655
Submission date Feb 04, 2023
Last update date Nov 09, 2023
Contact name Xaingyu Pan
E-mail(s) pangxueyu233@outlook.com
Organization name Sichuan University
Department State Key Laboratory of Biotherapy, West China Hospital, Sihcuan University.
Lab Chen & Liu Lab
Street address No.17 Renming road section3
City Chengdu, Cihna
State/province Sichuan
ZIP/Postal code 610041
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM7025550 WT_Ero1a
GSM7025551 KO_Ero1a
Relations
BioProject PRJNA931591

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE224525_RAW.tar 387.8 Mb (http)(custom) TAR (of TAR)
GSE224525_scRNA.All.harmony.rds.gz 527.7 Mb (ftp)(http) RDS
GSE224525_scRNA.CD8T.harmony.rds.gz 48.5 Mb (ftp)(http) RDS
GSE224525_scRNA.Macrophage.harmony.rds.gz 91.0 Mb (ftp)(http) RDS
GSE224525_scRNA.TandNK.harmony.rds.gz 70.3 Mb (ftp)(http) RDS
GSE224525_scRNA.Tumor.harmony.rds.gz 389.9 Mb (ftp)(http) RDS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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