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| Status |
Public on Sep 20, 2023 |
| Title |
Spatiotemporal trascriptomics of Bacillus subtilis swarming colony |
| Organism |
Bacillus subtilis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Using transcriptomics, we studied the spatiotemporal dynamics of B. subtilis swarming colonies on soft-agar surface and identified functional subpopulations.
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| Overall design |
B. subtilis cells swarming on soft-agar were collected by our custom sampling robot at various locations and time points and analyzed using RNA-Seq with 3 biological replicates.
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| Contributor(s) |
Nosho K, Jeckel H, Neuhaus K, Drescher K |
| Citation(s) |
37973866 |
| |
| Submission date |
Feb 02, 2023 |
| Last update date |
Dec 13, 2023 |
| Contact name |
Kazuki Nosho |
| Organization name |
University of Basel
|
| Department |
Biozentrum
|
| Street address |
Spitalstrasse 41
|
| City |
Basel |
| ZIP/Postal code |
4056 |
| Country |
Switzerland |
| |
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| Platforms (2) |
| GPL29318 |
Illumina HiSeq 3000 (Bacillus subtilis) |
| GPL30886 |
Illumina NovaSeq 6000 (Bacillus subtilis) |
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| Samples (317)
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| Relations |
| BioProject |
PRJNA930661 |
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