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Series GSE223669 Query DataSets for GSE223669
Status Public on Jan 24, 2024
Title RNA -seq analysis of cells co-culture with ROS producing cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The the experiment examines the non-cell autnomous effetc og ROS productionn on adjacent cells.
Overall design We co-cultured HEK293(+GFP) with ROS producing HEK293 (+DAAO) cells for 10 hr and FACS sorted out the GFP positive cells. We then compared the gene expression profiles of HEK293(+GFP) to HEk293 (+GFP) cells co-culture with ROS producing HEK293(DAAO) cells. Both GFP + WT controls and and ROS-co-culture cells were FASC sorted in this experiment.
Contributor(s) Sieber M
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Submission date Jan 25, 2023
Last update date Jan 24, 2024
Contact name Matt Sieber
Phone 2146456036
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines blvd, MC 9040 ND12.214
City Dallas
State/province Texas
ZIP/Postal code 75390
Country USA
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (6)
GSM6970327 ROS-co-cutured cells 1
GSM6970328 ROS-co-cutured cells 2
GSM6970329 ROS-co-cutured cells 3
BioProject PRJNA927249

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE223669_RAW.tar 1.0 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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