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Series GSE221744 Query DataSets for GSE221744
Status Public on Aug 01, 2024
Title Gene expression profile at single cell level of cardiomyocyte and non cardiomyocyte from the heart of pressure-overload model mice.
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The heart is composed of many cell types. We used single cell RNA sequencing (scRNA-seq) to analyze the diversity of cell types contained in the heart.
 
Overall design Cardiomyocyte and non cardiomyocyte from the heart of pressure-overload model mice were isolated by the Langendorff technique and analyzed using scRNAseq.
 
Contributor(s) Katoh M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 26, 2022
Last update date Aug 01, 2024
Contact name Manami Katoh
E-mail(s) brainztrust099@gmail.com
Organization name The University of Tokyo
Department Department of Cardiovascular Medicine
Street address 7-3-1 Hongo
City Bunkyo-ku
State/province Tokyo
ZIP/Postal code 113-8655
Country Japan
 
Platforms (2)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (1141)
GSM6894193 cardiomyocyte,sham, replicate1-1, scRNAseq
GSM6894194 cardiomyocyte,sham, replicate1-2, scRNAseq
GSM6894195 cardiomyocyte,sham, replicate1-3, scRNAseq
Relations
BioProject PRJNA915950
SRA SRP414829

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE221744_CTRL_AAV_1.xlsx 16.4 Mb (ftp)(http) XLSX
GSE221744_CTRL_AAV_2.xlsx 17.4 Mb (ftp)(http) XLSX
GSE221744_Igfbp7_AAV_1.xlsx 11.9 Mb (ftp)(http) XLSX
GSE221744_Igfbp7_AAV_2.xlsx 11.9 Mb (ftp)(http) XLSX
GSE221744_KLH_4w_1.xlsx 11.6 Mb (ftp)(http) XLSX
GSE221744_KLH_GSE221744_TAC4w_1.xlsx 15.6 Mb (ftp)(http) XLSX
GSE221744_Sham_1_barcodes.tsv.gz 19.2 Kb (ftp)(http) TSV
GSE221744_Sham_1_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE221744_Sham_1_matrix.mtx.gz 14.2 Mb (ftp)(http) MTX
GSE221744_Sham_2_barcodes.tsv.gz 35.5 Kb (ftp)(http) TSV
GSE221744_Sham_2_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE221744_Sham_2_matrix.mtx.gz 22.7 Mb (ftp)(http) MTX
GSE221744_TAC2w_1.xlsx 13.7 Mb (ftp)(http) XLSX
GSE221744_TAC2w_1_barcodes.tsv.gz 17.7 Kb (ftp)(http) TSV
GSE221744_TAC2w_1_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE221744_TAC2w_1_matrix.mtx.gz 22.8 Mb (ftp)(http) MTX
GSE221744_TAC2w_2.xlsx 13.3 Mb (ftp)(http) XLSX
GSE221744_TAC2w_2_barcodes.tsv.gz 13.6 Kb (ftp)(http) TSV
GSE221744_TAC2w_2_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE221744_TAC2w_2_matrix.mtx.gz 14.0 Mb (ftp)(http) MTX
GSE221744_TAC2w_CDK_1_barcodes.tsv.gz 49.8 Kb (ftp)(http) TSV
GSE221744_TAC2w_CDK_1_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE221744_TAC2w_CDK_1_matrix.mtx.gz 27.0 Mb (ftp)(http) MTX
GSE221744_TAC2w_CDK_2_barcodes.tsv.gz 29.1 Kb (ftp)(http) TSV
GSE221744_TAC2w_CDK_2_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE221744_TAC2w_CDK_2_matrix.mtx.gz 40.6 Mb (ftp)(http) MTX
GSE221744_TAC2w_CDK_i_1.xlsx 14.8 Mb (ftp)(http) XLSX
GSE221744_TAC2w_CDK_i_2.xlsx 15.5 Mb (ftp)(http) XLSX
GSE221744_TAC4w_vac_1.xlsx 16.1 Mb (ftp)(http) XLSX
GSE221744_VEcad_Igfbp7_TAC4w_1.xlsx 17.8 Mb (ftp)(http) XLSX
GSE221744_sham_1.xlsx 15.1 Mb (ftp)(http) XLSX
GSE221744_sham_2.xlsx 14.1 Mb (ftp)(http) XLSX
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Processed data are available on Series record

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