|
| Status |
Public on Aug 31, 2024 |
| Title |
Frizzled5 Maintains Homeostasis of Adult Intestinal Epithelium Through Organization of Chromatin Accessibility |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Analyze the gene profiles and chromatin accessibility change upon Fzd5 knockout in mouse intestinal epithelium
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| |
|
| Overall design |
ScRNA-seq of Intestinal epithelial cells, ScRNA-seq of Intestinal Lgr5 positive cells, ScRNA-seq of Ctrl and Fzd5KO Intestinal epithelial cells, and ScATAC-seq of Ctrl and Fzd5KO Intestinal nuclei
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| |
|
| Contributor(s) |
Deng L, Li L |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Dec 20, 2022 |
| Last update date |
Sep 01, 2024 |
| Contact name |
Shiyuan (Cynthia) Chen |
| E-mail(s) |
shc@stowers.org
|
| Organization name |
Stowers Institute for Medical Research
|
| Department |
Computational Biology
|
| Street address |
1000 E 50th St
|
| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
64110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (6)
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| This SubSeries is part of SuperSeries: |
|
| Relations |
| BioProject |
PRJNA914280 |
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