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Series GSE218093 Query DataSets for GSE218093
Status Public on Aug 23, 2023
Title SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1 [RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To determine the transcriptional impact of SETD7,MLL1 silencing in CRPC cells, we performed an RNA-seq analysis in those 22Rv1 stable cell lines (under hormone-depleted conditions)
 
Overall design Comparative gene expression profiling analysis of RNA-seq data in 22Rv1 cells transfected with siSETD7, siMLL versus siNTC (under hormone-depleted conditions)
 
Contributor(s) Wang Z, Cai C
Citation(s) 37549269
Submission date Nov 16, 2022
Last update date Aug 23, 2023
Contact name Zifeng Wang
E-mail(s) wzifeng8@gmail.com
Phone 6174709887
Organization name UMASS Boston
Department CPCT
Lab Changmeng Cai
Street address 100 Morrissey Blvd, ISC/4610
City Boston
State/province Massachusetts
ZIP/Postal code 02125
Country USA
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (10)
GSM6734611 CWR22-Rv1 cells, siNTC, repeat 1
GSM6734612 CWR22-Rv1 cells, siNTC, repeat 2
GSM6734613 CWR22-Rv1 cells, siNTC, repeat 3
This SubSeries is part of SuperSeries:
GSE218094 SETD7 functions as a transcription repressor in prostate cancer via methylating FOXA1
Relations
BioProject PRJNA902336

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218093_22RV1_siMLL_rawCount.txt.gz 4.8 Mb (ftp)(http) TXT
GSE218093_22RV1_siSETD7_rawCount.txt.gz 4.9 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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