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Series GSE217548 Query DataSets for GSE217548
Status Public on Nov 08, 2023
Title Mediator Subunit 30 Directs Myc Oncogenesis [PRO-seq]
Organism Homo sapiens
Experiment type Other
Summary Mediator Subunit 30 Directs Myc Oncogenesis [PRO-seq]
 
Overall design To investage the effect of med30 overespression on transcription, PRO-seq was performed in teton MED30 overexpression Mia PaCa-2 cells. Dox-induced MED30 expression Mia PaCa-2 stable cell line were treated or untreated with 0.5μg/ml doxycycline for 2 days before nuclei isolation. 1/50 number of drosophila S2 cells were spike-in for overall input control.
 
Contributor(s) Jin C, Oh S, Yuan W, Zhao G, Rosenfeld MG
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Submission date Nov 08, 2022
Last update date Nov 08, 2023
Contact name Guofeng Zhao
E-mail(s) gzhao@ucsd.edu
Phone 8582144108
Organization name UCSD
Department Medicine
Street address 9500 Gilman Dr.
City La Jolla
ZIP/Postal code 92037-0648
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM6721472 PRO-seq data for Ctrl in MED30 overexpression Mia PaCa-2 cells, no Dox replicate #1
GSM6721473 PRO-seq data for Ctrl in MED30 overexpression Mia PaCa-2 cells, no Dox replicate #2
GSM6721474 PRO-seq data for MED30 OE in MED30 overexpression Mia PaCa-2 cells, no Dox replicate #1
This SubSeries is part of SuperSeries:
GSE217549 Mediator Subunit 30 Directs Myc Oncogenesis
Relations
BioProject PRJNA899519

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE217548_RAW.tar 306.1 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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