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Series GSE216233 Query DataSets for GSE216233
Status Public on Jul 12, 2023
Title Beta cell dysfunction and dedifferentiation induced by Bone Morphogenetic Protein (BMP)-2 is associated with histone modifications and decreased NeuroD1 chromatin binding
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37407581
Submission date Oct 20, 2022
Last update date Jul 13, 2023
Contact name Matthew Wortham
E-mail(s) mwortham@ucsd.edu
Phone 8582460588
Organization name University of California, San Diego
Lab Maike Sander
Street address 2880 Torrey Pines Scenic Drive, Sanford Consortium for Regenerative Medicine, Room 3102
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (27)
GSM6663243 H3K27ac_ChIPseq_Ctrl_rep1
GSM6663244 H3K27ac_ChIPseq_BMP2_rep1
GSM6663245 H3K4me3_ChIPseq_Ctrl_rep1
This SuperSeries is composed of the following SubSeries:
GSE216230 Beta cell dysfunction and dedifferentiation induced by Bone Morphogenetic Protein (BMP)-2 is associated with histone modifications and decreased NeuroD1 chromatin binding [Histone ChIP-seq]
GSE216231 Beta cell dysfunction and dedifferentiation induced by Bone Morphogenetic Protein (BMP)-2 is associated with histone modifications and decreased NeuroD1 chromatin binding {RNA-seq]
GSE216232 Beta cell dysfunction and dedifferentiation induced by Bone Morphogenetic Protein (BMP)-2 is associated with histone modifications and decreased NeuroD1 chromatin binding [NeuroD1 ChIP-seq]
Relations
BioProject PRJNA892627

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216233_RAW.tar 3.8 Gb (http)(custom) TAR (of BIGWIG, BW)
SRA Run SelectorHelp

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