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GEO accession:
Series GSE216135
Query DataSets for GSE216135
Status
Public on May 03, 2023
Title
PAO1 Hfq-V RIL-seq and RNA-seq
Organisms
Pseudomonas aeruginosa
;
Pseudomonas aeruginosa PAO1
Experiment type
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
37285605
NIH grant(s)
Grant ID
Grant title
Affiliation
Name
R01 AI143771
Global post-transcriptional regulators in P. aeruginosa
CHILDREN'S HOSPITAL
SIMON L DOVE
Submission date
Oct 19, 2022
Last update date
Aug 02, 2023
Contact name
Michael J Gebhardt
Organization name
University of Iowa
Department
Department of Microbiology and Microbiology
Lab
Gebhardt
Street address
431 Newton Road, 200A EMRB
City
Iowa City
State/province
IA
ZIP/Postal code
52242
Country
USA
Platforms (2)
GPL23999
Illumina NextSeq 500 (Pseudomonas aeruginosa PAO1)
GPL33271
NextSeq 2000 (Pseudomonas aeruginosa)
Samples (33)
Less...
More...
GSM6659105
PAO1 hfq-V EP RIL-IP replicate A
GSM6659106
PAO1 hfq-V EP RIL-IP replicate B
GSM6659107
PAO1 hfq-V EP RIL-IP replicate C
GSM6659108
PAO1 EP RIL-IP replicate A
GSM6659109
PAO1 EP RIL-IP replicate B
GSM6659110
PAO1 EP RIL-IP replicate C
GSM6659111
PAO1 hfq-V SP RIL-IP replicate A
GSM6659112
PAO1 hfq-V SP RIL-IP replicate B
GSM6659113
PAO1 hfq-V SP RIL-IP replicate C
GSM6659114
PAO1 SP RIL-IP replicate A
GSM6659115
PAO1 SP RIL-IP replicate B
GSM6659116
PAO1 SP RIL-IP replicate C
GSM6659117
PAO1 hfq-V EP total RNA replicate A
GSM6659118
PAO1 hfq-V EP total RNA replicate B
GSM6659119
PAO1 hfq-V EP total RNA replicate C
GSM6659120
PAO1 EP total RNA replicate A
GSM6659121
PAO1 EP total RNA replicate B
GSM6659122
PAO1 EP total RNA replicate C
GSM6659123
PAO1 hfq-V SP total RNA replicate A
GSM6659124
PAO1 hfq-V SP total RNA replicate B
GSM6659125
PAO1 hfq-V SP total RNA replicate C
GSM6659126
PAO1 SP total RNA replicate A
GSM6659127
PAO1 SP total RNA replicate B
GSM6659128
PAO1 SP total RNA replicate C
GSM7107977
PAO1 ∆phrS pEV replicate A
GSM7107978
PAO1 ∆phrS pEV replicate B
GSM7107979
PAO1 ∆phrS pEV replicate C
GSM7107980
PAO1 ∆phrS pPhrS replicate A
GSM7107981
PAO1 ∆phrS pPhrS replicate B
GSM7107982
PAO1 ∆phrS pPhrS replicate C
GSM7107983
PAO1 ∆phrS pPhrS∆seed replicate A
GSM7107984
PAO1 ∆phrS pPhrS∆seed replicate B
GSM7107985
PAO1 ∆phrS pPhrS∆seed replicate C
This SuperSeries is composed of the following SubSeries:
GSE216133
PAO1 Hfq-V RIL-seq
GSE216134
PAO1 Hfq-V RNA-seq
GSE227772
PhrS pulse expression RNA-seq
Relations
BioProject
PRJNA892133
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE216135_RAW.tar
205.3 Mb
(http)
(custom)
TAR (of BW)
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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