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Series GSE215033 Query DataSets for GSE215033
Status Public on Jan 31, 2023
Title Chamber selective enhancers identified in vivo by AAV-MPRA
Organisms Mus musculus; synthetic construct
Experiment type Other
Summary Measurement the activity of candidate CSEs in aCMs and vCMs.
 
Overall design AAV library was delivered to P0 pups. Atria and ventricles were harvested at P7 for MPRA library construction.
 
Contributor(s) Cao Y, Zhang X, Akerberg BN, Pu WT
Citation(s) 36705030
Submission date Oct 07, 2022
Last update date May 02, 2023
Contact name Xiaoran Zhang
E-mail(s) xiaoran.zhang@childrens.harvard.edu
Phone 8574259855
Organization name Boston Children's Hospital
Department Cardiology
Lab Pu lab
Street address 14 Perkins Square, Apt 11
City Jamaica Plain
State/province MA
ZIP/Postal code 02130
Country USA
 
Platforms (2)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL26526 Illumina NovaSeq 6000 (synthetic construct)
Samples (15)
GSM6620219 AV_MPRA_A1
GSM6620220 AV_MPRA_A2
GSM6620221 AV_MPRA_A3
This SubSeries is part of SuperSeries:
GSE215065 Regulation of mouse chamber selective enhancers
Relations
BioProject PRJNA888110

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE215033_AV_enhancers_400bp_MPRA_readscount.txt.gz 141.5 Kb (ftp)(http) TXT
GSE215033_RAW.tar 840.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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