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Series GSE214861 Query DataSets for GSE214861
Status Public on Oct 12, 2023
Title Myelin-Associated Oligodendrocytic Basic Protein-Dependent Myelin Repair Confers the Long-lasting Antidepressant Effect of Ketamine
Organism Mus musculus
Experiment type Other
Summary To examine ketamine’s long-lasting effects on gene expression in the brains of mice exhibiting depression-like behaviors, we used spatial transcriptomics (ST) to analyze transcriptomics on the cortices of mice exposed to chronic social defeat stress (CSDS) and treated with ketamine.
 
Overall design Wild type C57 mice went through CSDS and resilient and susceptible mice were selected by social interaction test. Some susceptible mice were randomly selected and treated with ketamine. the depression-like behaviors were examined by behavioral tests and the brain samples for ST were collected 7 days after ketamine-administration.
Web link https://pubmed.ncbi.nlm.nih.gov/37848708/
 
Contributor(s) Zu Q, Yao X, Huang C, Wang Y
Citation(s) 37848708
Submission date Oct 05, 2022
Last update date Jan 11, 2024
Contact name Chaoli Huang
E-mail(s) chunyang@njmu.edu.cn
Phone +8613655195884
Organization name he First Affiliated Hospital of Nanjing Medical University
Street address 300 Guangzhou Road
City Nanjing
State/province Jiangsu
ZIP/Postal code 210003
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM6616887 Control
GSM6616888 Resilient
GSM6616889 Susceptible
Relations
BioProject PRJNA887410

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE214861_RAW.tar 26.3 Mb (http)(custom) TAR (of PDF, PNG, XLS)
GSE214861_diffexp_genes.tar.gz 94.0 Kb (ftp)(http) TAR
GSE214861_tsne_Dimension_Reduction_coordination.csv.gz 352.3 Kb (ftp)(http) CSV
GSE214861_tsne_groupby_cluster_resolution0.4_plot.png.gz 6.0 Mb (ftp)(http) PNG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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