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| Status |
Public on Apr 03, 2023 |
| Title |
Hypothalamic astrocytes TRAP-seq in ORX/HFD mice |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
3' mRNA-sequencing of the immunoprecipitated and supernatant fractions after Translating Ribosome Affinity Purification (TRAP) targeted to hypothalamic astrocytes RNA (from Aldh1l1eGFP-L10a mice) for 3 experimental conditions: chow diet; high-fat diet; high-fat diet + orchiectomy (Sham-chow n=7, Sham-HFD n=6, ORX-HFD n=7)
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| Overall design |
3' mRNA-sequencing; Sham-chow n=7, Sham-HFD n=6, ORX-HFD n=7
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| Contributor(s) |
Dorfman MD, Monfeuga T, Melhorn SJ, Kanter JE, Frey JM, Fasnacht RD, Chandran A, Lala E, Velasco I, Rubinow KB, Meek TH, Schur EA, Bornfeldt KE, Thaler JP |
| Citation(s) |
37053049 |
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| Submission date |
Oct 03, 2022 |
| Last update date |
Jul 03, 2023 |
| Contact name |
Thomas Monfeuga |
| E-mail(s) |
tsmf@novonordisk.com
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| Organization name |
Novo Nordisk Research Centre Oxford
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| Street address |
Innovation Building, Old Road Campus, Roosevelt Drive
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| City |
Oxford |
| ZIP/Postal code |
OX3 7FZ |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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| Samples (40)
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| Relations |
| BioProject |
PRJNA886669 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE214683_gene_level_TPM_matrix.txt.gz |
5.4 Mb |
(ftp)(http) |
TXT |
| GSE214683_gene_level_raw_counts_matrix_for_deconvolution.txt.gz |
1.4 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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