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Series GSE214253 Query DataSets for GSE214253
Status Public on Dec 31, 2022
Title Akkermansia muciniphila blunts Th17 cells [Colonic lymphocytes]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary DSS-induced colitis mice were treated with PBS, A. muciniphila secreting extracellular vesicles (SEV) via gavage every day. Mice lymphocytes of colon tissues from each of the indicated group (Colitis and SEV) in were collected. Then CD4+ T cells are isolated from lymphocytes. These cells were submitted for scRNA-seq.
Overall design Seven mice colon tissues from each of the indicated group (Colitis and SEV) were collected. Lymphocytes of three or four colon tissues from each group were mixed equally as one sample and submitted for scRNA-seq.
Contributor(s) Xu Y, Zheng C, Jiang Y, Zhang M
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Submission date Sep 27, 2022
Last update date Jan 02, 2023
Contact name Mingming Zhang
Phone 18551831115
Organization name Shanghai Jiao Tong University School of Medicine
Street address 145 Middle Shandong Road
City Shanghai
ZIP/Postal code 200001
Country China
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM6602166 groupA Colitis, scRNAseq
GSM6602167 groupB SEV, scRNAseq
BioProject PRJNA884634

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Supplementary file Size Download File type/resource
GSE214253_RAW.tar 126.7 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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