|
| Status |
Public on Sep 22, 2022 |
| Title |
T cells specific for alpha-myosin drive immunotherapy related myocarditis |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
Single cell RNA and TCR sequencing of murine hearts and human alpha-myosin expanded blood
|
| |
|
| Overall design |
Single cell RNA and TCR sequencing
|
| |
|
| Contributor(s) |
Axelrod M |
| Citation(s) |
36385524 |
| |
| Submission date |
Sep 15, 2022 |
| Last update date |
Feb 10, 2023 |
| Contact name |
Margaret L Axelrod |
| E-mail(s) |
margaretaxelrod@gmail.com, margaret.l.axelrod@vanderbilt.edu
|
| Organization name |
Vanderbilt University
|
| Department |
Medicine
|
| Lab |
Justin Balko
|
| Street address |
2200 Pierce Ave, 777 PRB
|
| City |
Nashville |
| State/province |
TN |
| ZIP/Postal code |
37232 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA880920 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE213486_3676-JB-1-barcodes.tsv.gz |
5.5 Kb |
(ftp)(http) |
TSV |
| GSE213486_3676-JB-1-features.tsv.gz |
245.2 Kb |
(ftp)(http) |
TSV |
| GSE213486_3676-JB-1-matrix.mtx.gz |
6.4 Mb |
(ftp)(http) |
MTX |
| GSE213486_3676-JB-2-barcodes.tsv.gz |
15.0 Kb |
(ftp)(http) |
TSV |
| GSE213486_3676-JB-2-features.tsv.gz |
245.2 Kb |
(ftp)(http) |
TSV |
| GSE213486_3676-JB-2-matrix.mtx.gz |
12.8 Mb |
(ftp)(http) |
MTX |
| GSE213486_5692-MA-1-barcodes.tsv.gz |
18.3 Kb |
(ftp)(http) |
TSV |
| GSE213486_5692-MA-1-features.tsv.gz |
284.1 Kb |
(ftp)(http) |
TSV |
| GSE213486_5692-MA-1-matrix.mtx.gz |
15.5 Mb |
(ftp)(http) |
MTX |
| GSE213486_7374-MA-1-barcodes.tsv.gz |
74.3 Kb |
(ftp)(http) |
TSV |
| GSE213486_7374-MA-1-features.tsv.gz |
325.6 Kb |
(ftp)(http) |
TSV |
| GSE213486_7374-MA-1-matrix.mtx.gz |
162.8 Mb |
(ftp)(http) |
MTX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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