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Series GSE213467 Query DataSets for GSE213467
Status Public on Jan 04, 2023
Title Areas of H3K27 tri-methylation in CD8+ T cells from the spleens of LCMV-Armstrong or LCMV-Clone 13 infected mice
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The profiles of H3K27 tri-methylation in CD8+ T cells from LCMV-Armstrong and LCMV-Clone 13 infected mice are known to be distinct from one another. We used CUT&RUN (Cleavage Under Targets and Release Using Nuclease) to analyze these differences in splenic CD8+ T cells of these two infection conditions.
 
Overall design Adoptively transferred CD8+ P14 T cells from the spleen of C57BL/6 mice were isolated by Fluorescence-activated cell sorting (FACS) at day 7 post-infection according to the presence of CD45.1 congenic marker signal and analyzed using CUT&RUN.
 
Contributor(s) Quezada L, Jin W
Citation(s) 36716323
Submission date Sep 15, 2022
Last update date Apr 05, 2023
Contact name Gene W Yeo
E-mail(s) vincenzojin@gmail.com
Phone +1-650-695-9262
Organization name University of California, San Diego
Department Cellular and Molecular Medicine
Street address 9500 Gilman Dr
City La Jolla
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM6586821 H3K27me3, Armstrong
GSM6586822 H3K27me3, Clone13
GSM6586823 H3K4me3, Armstrong
Relations
BioProject PRJNA880890

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE213467_RAW.tar 483.8 Mb (http)(custom) TAR (of BW, CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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