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Series GSE212733 Query DataSets for GSE212733
Status Public on Sep 29, 2023
Title Phase-separated CCER1 coordinates histone-to-protamine transition and fertility
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary Idiopathic fertility disorders are associated with mutations in various genes. Here, we report that coiled-coil glutamate-rich protein 1 (CCER1), a germline-specific and intrinsically disordered protein (IDP), mediates post-meiotic sperm differentiation, while CCER1 deficiency results in defective sperm chromatin compaction and infertility in mice. CCER1 increases transition protein (Tnp1/2) and protamine (Prm1/2) transcription and serves as a multifaceted mediator for multiple epigenetic modification events of histones during the histone to protamine transition (HTP). Immiscible with heterochromatin in the nucleus, CCER1 self-assembles into polymer droplet and acts as a liquid-liquid phase separated condensate in the nucleus. Notably, we identified the loss-of function variants of human CCER1 (hCCER1) in five patients with non-obstuctive azoospermia (NOA) while absent in 2,713 fertile controls. The mutants led to premature termination or frameshift of CCER1 translation and disrupted condensates in vitro. In conclusion, we propose that nuclear CCER1 is a novel phase-separated condensate that links histone epigenetic modifications, sperm HTP transitions, chromatin condensation, and male fertility.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for Ccer1 WT and KO testis.

To confirm the condensate state in the Ccer1 -/- mutants, we took advantage of in situ Hi-C to illustrate the chromatin state in both Ccer1 +/+ and Ccer1-/- sperm at the molecular level."
 
Contributor(s) Qin D, Zhang Y, Gu Y, Wang S, Xie W, Hu Z, Wu X
Citation(s) 38081819
Submission date Sep 06, 2022
Last update date Jan 02, 2024
Contact name Jimiao Gao
E-mail(s) Gaojimiao_Gloria@stu.njmu.edu.cn
Phone +8618061621262
Organization name Nanjing Medical University
Street address 101Longmian Avenue, Jiangning District, Nanjing 211166, P.R. China
City Nanjing
ZIP/Postal code 211166
Country China
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (11)
GSM6544220 Testis Ccer1 WT rep1
GSM6544221 Testis Ccer1 WT rep2
GSM6544222 Testis Ccer1 WT rep3
Relations
BioProject PRJNA877103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212733_RAW.tar 2.7 Gb (http)(custom) TAR (of HIC, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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