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| Status |
Public on Oct 11, 2022 |
| Title |
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics |
| Organism |
Mus musculus |
| Experiment type |
Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
37092728 |
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| Submission date |
Aug 31, 2022 |
| Last update date |
Apr 30, 2023 |
| Contact name |
Anne E West |
| E-mail(s) |
west@neuro.duke.edu
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| Organization name |
Duke University
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| Department |
Neurobiology
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| Lab |
West Lab
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| Street address |
311 Research Dr
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| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27705 |
| Country |
USA |
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| Platforms (2) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (54)
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| GSM6532819 |
CGN, DIV1, H3K27me3, CUT&RUN, Rep 1 [CGN_D1_H3K27me3_biol_rep_1] |
| GSM6532820 |
CGN, DIV1, H3K27me3, CUT&RUN, Rep 2 [CGN_D1_H3K27me3_biol_rep_2] |
| GSM6532821 |
CGN, DIV1, H3K27me3, CUT&RUN, Rep 3 [CGN_D1_H3K27me3_biol_rep_3] |
| GSM6532822 |
CGN, DIV3, H3K27me3, CUT&RUN, Rep 1 [CGN_D3_H3K27me3_biol_rep_1] |
| GSM6532823 |
CGN, DIV3, H3K27me3, CUT&RUN, Rep 2 [CGN_D3_H3K27me3_biol_rep_2] |
| GSM6532824 |
CGN, DIV3, H3K27me3, CUT&RUN, Rep 3 [CGN_D3_H3K27me3_biol_rep_3] |
| GSM6532825 |
CGN, DIV5, H3K27me3, CUT&RUN, Rep 1 [CGN_D5_H3K27me3_biol_rep_1] |
| GSM6532826 |
CGN, DIV5, H3K27me3, CUT&RUN, Rep 2 [CGN_D5_H3K27me3_biol_rep_2] |
| GSM6532827 |
CGN, DIV5, H3K27me3, CUT&RUN, Rep 3 [CGN_D5_H3K27me3_biol_rep_3] |
| GSM6532828 |
CGN, DIV7, H3K27me3, CUT&RUN, Rep 1 [CGN_D7_H3K27me3_biol_rep_1] |
| GSM6532829 |
CGN, DIV7, H3K27me3, CUT&RUN, Rep 2 [CGN_D7_H3K27me3_biol_rep_2] |
| GSM6532830 |
CGN, DIV7, H3K27me3, CUT&RUN, Rep 3 [CGN_D7_H3K27me3_biol_rep_3] |
| GSM6532831 |
CGN, DMSO, H3K27me3, CUT&RUN, Rep 1 [CGN_DMSO_biol_rep_1] |
| GSM6532832 |
CGN, DMSO, H3K27me3, CUT&RUN, Rep 2 [CGN_DMSO_biol_rep_2] |
| GSM6532833 |
CGN, DMSO, H3K27me3, CUT&RUN, Rep 3 [CGN_DMSO_biol_rep_3] |
| GSM6532834 |
CGN, GSK-126, H3K27me3, CUT&RUN, Rep 1 [CGN_G126_biol_rep_1] |
| GSM6532835 |
CGN, GSK-126, H3K27me3, CUT&RUN, Rep 2 [CGN_G126_biol_rep_2] |
| GSM6532836 |
CGN, GSK-126, H3K27me3, CUT&RUN, Rep 3 [CGN_G126_biol_rep_3] |
| GSM6532837 |
CGN, DMSO, H3K27me3, CUT&RUN, Rep 1 [CGN_GJ4_0uM_biol_rep_1] |
| GSM6532838 |
CGN, DMSO, H3K27me3, CUT&RUN, Rep 2 [CGN_GJ4_0uM_biol_rep_2] |
| GSM6532839 |
CGN, DMSO, H3K27me3, CUT&RUN, Rep 3 [CGN_GJ4_0uM_biol_rep_3] |
| GSM6532840 |
CGN, GSK-J4, H3K27me3, CUT&RUN, Rep 1 [CGN_GJ4_1uM_biol_rep_1] |
| GSM6532841 |
CGN, GSK-J4, H3K27me3, CUT&RUN, Rep 2 [CGN_GJ4_1uM_biol_rep_2] |
| GSM6532842 |
CGN, GSK-J4, H3K27me3, CUT&RUN, Rep 3 [CGN_GJ4_1uM_biol_rep_3] |
| GSM6532843 |
P7, H3K27me3, ChIP-seq, Rep 1 |
| GSM6532844 |
P7, H3K27me3, ChIP-seq, Rep 2 |
| GSM6532845 |
P7, H3K27me3, ChIP-seq, Rep 3 |
| GSM6532846 |
P14, H3K27me3, ChIP-seq, Rep 1 |
| GSM6532847 |
P14, H3K27me3, ChIP-seq, Rep 2 |
| GSM6532848 |
P14, H3K27me3, ChIP-seq, Rep 3 |
| GSM6532849 |
P60, H3K27me3, ChIP-seq, Rep 1 |
| GSM6532850 |
P60, H3K27me3, ChIP-seq, Rep 2 |
| GSM6532851 |
P60, H3K27me3, ChIP-seq, Rep 3 |
| GSM6532852 |
Kdm6b-WT, H3K27me3, ChIP-seq, Rep 1 |
| GSM6532853 |
Kdm6b-WT, H3K27me3, ChIP-seq, Rep 2 |
| GSM6532854 |
Kdm6b-cKO, H3K27me3, ChIP-seq, Rep 1 |
| GSM6532855 |
Kdm6b-cKO, H3K27me3, ChIP-seq, Rep 2 |
| GSM6532856 |
Kdm6b-cKO, H3K27me3, ChIP-seq, Rep 3 |
| GSM6532857 |
Kdm6b_WT_RNA-seq_biol_rep_1 |
| GSM6532858 |
Kdm6b_WT_RNA-seq_biol_rep_2 |
| GSM6532859 |
Kdm6b_cKO_RNA-seq_biol_rep_1 |
| GSM6532860 |
Kdm6b_cKO_RNA-seq_biol_rep_2 |
| GSM6754821 |
CGN, DMSO, RNA-seq, Rep 1 |
| GSM6754822 |
CGN, DMSO, RNA-seq, Rep 2 |
| GSM6754823 |
CGN, DMSO, RNA-seq, Rep 3 |
| GSM6754824 |
CGN, GSK-126, RNA-seq, Rep 1 |
| GSM6754825 |
CGN, GSK-126, RNA-seq, Rep 2 |
| GSM6754826 |
CGN, GSK-126, RNA-seq, Rep 3 |
| GSM7232965 |
CGN, DMSO_DIV3, RNA-seq, Rep 1 |
| GSM7232966 |
CGN, DMSO_DIV3, RNA-seq, Rep 2 |
| GSM7232967 |
CGN, DMSO_DIV3, RNA-seq, Rep 3 |
| GSM7232968 |
CGN, GSK-126_DIV3, RNA-seq, Rep 1 |
| GSM7232969 |
CGN, GSK-126_DIV3, RNA-seq, Rep 2 |
| GSM7232970 |
CGN, GSK-126_DIV3, RNA-seq, Rep 3 |
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| This SuperSeries is composed of the following SubSeries:
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| GSE212438 |
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics |
| GSE212439 |
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics |
| GSE212440 |
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics |
| GSE218685 |
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics [RNA-Seq] |
| GSE230712 |
Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics [RNA-seq DIV3] |
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| Relations |
| BioProject |
PRJNA875429 |
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