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Series GSE212102 Query DataSets for GSE212102
Status Public on Aug 29, 2022
Title Development and characteristics of an apetalous nullisomic in Brassica juncea through interspecific hybridization
Organism Brassica juncea
Experiment type Expression profiling by high throughput sequencing
Summary The aim of this study was to compare apetalous nullisomic with its parent. Transcriptome analysis (RNA-SEQ) and quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) of parent "YLC" andapetalous nullisomic were performed, and the best high-throughput data analysis protocol was evaluated
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for apetalous nullisomic "AN" and its parent "YLC"
 
Contributor(s) Bin Z, Jie Y
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Submission date Aug 26, 2022
Last update date Aug 29, 2022
Contact name jie yu
E-mail(s) yujiehzs@126.com
Phone 18208671213
Organization name Guizhou Normal Universuty
Street address 116 Baoshan North Road
City Guiyang
ZIP/Postal code 550000
Country China
 
Platforms (1)
GPL32601 Illumina NovaSeq 6000 (Brassica juncea)
Samples (6)
GSM6509411 S1-1
GSM6509412 S1-2
GSM6509413 S1-3
Relations
BioProject PRJNA874019

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212102_Bju.SCHZ.V1.2.gff.gz 11.1 Mb (ftp)(http) GFF
GSE212102_gene.fpkm.matrix.annot.txt.gz 12.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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