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Series GSE211600 Query DataSets for GSE211600
Status Public on Apr 24, 2023
Title Off-target effect of engineered AsCas12f variants
Organism Homo sapiens
Experiment type Other
Summary Cells were transfected with plasmids containing AsCas12f variants and sgRNAs for gene-editing. Off-target effect was determined using GUIDE-seq on an Illumina Nextseq platform.
Overall design GUIDE-seq
Web link
Contributor(s) Wu T, Lyu R, Tang W
Citation(s) 37400536
Submission date Aug 18, 2022
Last update date Jul 24, 2023
Contact name Tong Wu
Organization name University of Chicago
Street address 929 E 57th St. GCIS E335
City Chicago
State/province Illinois
ZIP/Postal code 60637
Country USA
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (34)
GSM6481323 AsCas12f-WT-TP53_2-rep1
GSM6481324 AsCas12f-WT-TP53_2-rep2
GSM6481325 AsCas12f-v4.1-TP53_2-rep1
BioProject PRJNA871035

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211600_RAW.tar 365.8 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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