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Series GSE211527 Query DataSets for GSE211527
Status Public on Aug 20, 2023
Title Reconstruction of Dynamic Mammary Mini Gland in vitro for Normal Physiology and Oncogenesis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Organoid culture has been extensively exploited for normal tissue reconstruction and disease modeling, however, it is still challenging to establish physiologically relevant architecture, size and functions in homeostasis. Here, we describe the development of a long-term adult stem cell derived mammary mini-gland culture system that supports robust 3D outgrowths recapitulating the morphology, cellular context, transcriptional heterogeneity of the normal mammary gland. The self-organization ability of stem cells and the stability of the outgrowths were determined by a coordinated combination of extracellular matrix, environmental signalings and dynamic physiological cycles. These mini glands are hormone responsive and reproduce the entire postnatal mammary development including puberty, estrous cycle, lactation and involution. Most intriguingly, these mini glands maintained the mammary stem cells and represented the fate transition from embryonic bipotency to postnatal unipotency in lineage tracing assays. In addition, induced oncogene expression in the mini glands drove the clinically relevant cancer initiation that can be monitored chronologically. Together, this study provides an experimental system fostering a dynamic organ miniature that can be studied chronologically and spatially for physiologically relevant biological processes with complexity.
 
Overall design Single cell RNA profiles of mammary gland basal cells and luminal cells from primary mammary gland and mammary mini gland
Web link https://pubmed.ncbi.nlm.nih.gov/37919421/
 
Contributor(s) Yuan L, Xie S, Bai H, Liu X, Cai P, Lu J, Wang C, Lin Z, Li S, Guo Y, Cai S
Citation(s) 37919421
Submission date Aug 18, 2022
Last update date Nov 19, 2023
Contact name Shang Cai
E-mail(s) caishang@westlake.edu.cn
Organization name Westlake University
Department School of Life Science
Lab Stem Cell and Cancer Laboratory
Street address Shilongshan Road No.18, Cloud Town, Xihu District
City HangZhou
State/province ZheJiang
ZIP/Postal code 310013
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM6475163 FVBB
GSM6475164 FVBL
GSM6475165 Mini glandB1
Relations
BioProject PRJNA870729

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE211527_Barcode.txt.gz 662 b (ftp)(http) TXT
GSE211527_RAW.tar 2.9 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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