NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE210817 Query DataSets for GSE210817
Status Public on Oct 31, 2023
Title Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation
Organisms Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38062010
Submission date Aug 09, 2022
Last update date Jan 15, 2024
Contact name Xiao Ge
Organization name Shanghai JiaoTong University
Street address No. 800 Dongchuan Road
City Shanghai
ZIP/Postal code 200240
Country China
 
Platforms (4)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL21273 HiSeq X Ten (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (571)
GSM4046041 4C_p0_cortex_CBSg_a del_rep1
GSM4046042 4C_p0_cortex_CBSg_a del_rep2
GSM4046043 4C_p0_cortex_CBSg_b-e del_rep1
This SuperSeries is composed of the following SubSeries:
GSE210815 Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [ChIP-seq]
GSE210816 Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [ATAC-seq]
GSE211024 Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation [4C]
Relations
BioProject PRJNA867663

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE210817_RAW.tar 1.2 Gb (http)(custom) TAR (of BEDGRAPH, FPKM_TRACKING, WIG)
SRA Run SelectorHelp
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap