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Series GSE206842 Query DataSets for GSE206842
Status Public on Jul 12, 2022
Title Epigenome analysis of monocytes and derived nurse-like cells from chronic lymphocytic leukemia patients, along with healthy-donor controls
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Monocytes and matching culture-derived nurse-like cells were compared using Illumina's EPIC/850k arrays
Monocytes isolated using MACS and NLCs isolated using cytometry sorting as CD14+/CD19-
 
Overall design Bisulphite-converted DNA was hybridized to Illumina EPIC/850k chips.
 
Contributor(s) Butchar JP, Oakes CC
Citation(s) 35995507
Submission date Jun 23, 2022
Last update date Oct 19, 2022
Contact name Jonathan P Butchar
E-mail(s) jon.butchar@osumc.edu
Organization name The Ohio State University
Department Internal Medicine
Lab Tridandapani
Street address 400 W. 12th Avenue
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (11)
GSM6265648 CLL Monocytes 1
GSM6265649 CLL Monocytes 2
GSM6265650 CLL Monocytes 3
Relations
BioProject PRJNA852346

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206842_RAW.tar 318.2 Mb (http)(custom) TAR (of IDAT)
GSE206842_Top_differentially-methylated_CpGs_CLL_mono_to_NLC_wk2.xlsx 1017.4 Kb (ftp)(http) XLSX
GSE206842_processed_data.txt.gz 52.0 Mb (ftp)(http) TXT
GSE206842_signal_intensities.txt.gz 50.3 Mb (ftp)(http) TXT
Processed data are available on Series record

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