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Series GSE206458 Query DataSets for GSE206458
Status Public on Oct 04, 2022
Title PTEN directs developmental and metabolic signaling for innate-like T cells fate and tissue homeostasis [scRNA-seq and scTCR-seq Exp2]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary Developmental and metabolic signaling networks underpinning type-17 cell fate decisions in dictating tissue homeostasis versus tissue homeostasis
 
Overall design We used scRNA-seq and scTCR-seq to profile pre-selection DP, post-selection DP, and CCR6+CD127+TCRb+ thymocytes of WT and Cd4CrePtenfl/fl mice
 
Contributor(s) Risch I, Sun Y, Shi H, Chi H
Citation(s) 36302969
Submission date Jun 20, 2022
Last update date Jan 03, 2023
Contact name Hongbo Chi
E-mail(s) hongbo.chi@stjude.org
Organization name St Jude Children's Research Hospital
Department Immunology
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (6)
GSM6254883 wild-type GEX1, experiment 2
GSM6254884 wild-type GEX2, experiment 2
GSM6254885 PTEN T cell-specific knockout GEX1, experiment 2
This SubSeries is part of SuperSeries:
GSE179512 Thymic development of type-17 innate-like T cells depends on PTEN
Relations
BioProject PRJNA851033

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206458_RAW.tar 181.1 Mb (http)(custom) TAR (of CSV, TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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