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Series GSE205846 Query DataSets for GSE205846
Status Public on Aug 18, 2023
Title Hepatocyte FBXW7-dependent activity of nutrient-sensing nuclear receptors controls systemic energy homeostasis and NASH progression [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Nonalcoholic steatohepatitis (NASH) is epidemiologically associated with obesity and diabetes and can lead to liver cirrhosis and hepatocellular carcinoma if left untreated. The intricate signaling pathways that orchestrate hepatocyte energy metabolism and cellular stress, intrahepatic cell crosstalk, as well as interplay between peripheral tissues remain elusive and are crucial for the development of anti-NASH therapies. Herein, we reveal E3 ligase FBXW7 as a key factor regulating hepatic catabolism, stress responses, systemic energy homeostasis, and NASH pathogenesis, with attenuated FBXW7 expression as a feature of advanced NASH. Multiomics analysis and pharmacological intervention showed that loss of FBXW7 function in hepatocytes disrupts a metabolic transcriptional axis conjointly controlled by the nutrient-sensing nuclear receptors ERRα and PPARα, resulting in suppression of fatty acid oxidation, elevated ER stress, apoptosis, immune infiltration, fibrogenesis, and ultimately NASH progression. These results provide the foundation for developing alternative strategies co-targeting ERRα and PPARα for the treatment of NASH.
 
Overall design RNA-seq analysis of livers (n=4) isolated from WT and ERRa KO mice on a C57BL/6N genetic background fed either a chow or high-fat diet (HFD) for 15 weeks initiated from 6 weeks of age.
 
Contributor(s) Dufour CR, B'Chir W, Xia H, Giguere V
Citation(s) 37914694
Submission date Jun 10, 2022
Last update date Nov 16, 2023
Contact name Vincent Giguère
E-mail(s) vincent.giguere@mcgill.ca
Phone 514-398-5899
Organization name McGill University
Department Goodman Cancer Centre
Street address 1160 Pine Ave West, McIntyre Bldg Room 710
City Montréal
State/province QC
ZIP/Postal code H3A 1A3
Country Canada
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (16)
GSM6234428 Liver chow diet WT biol rep 1
GSM6234429 Liver chow diet WT biol rep 2
GSM6234430 Liver chow diet WT biol rep 3
This SubSeries is part of SuperSeries:
GSE205847 Hepatocyte FBXW7-dependent activity of nutrient-sensing nuclear receptors controls systemic energy homeostasis and NASH progression
Relations
BioProject PRJNA847944

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Supplementary file Size Download File type/resource
GSE205846_fpkm_all_samples.txt.gz 2.0 Mb (ftp)(http) TXT
GSE205846_readcount_all_samples.txt.gz 852.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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