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Series GSE204983 Query DataSets for GSE204983
Status Public on Aug 24, 2022
Title A dual role for the RNA helicase DHX34 in NMD and pre-mRNA splicing and its role in familial AML/MDS (RNA-Seq I)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the effect of DHX34 depletion on transcription and splicing, DHX34 was knocked down in HeLa cells.
 
Overall design DHX34 was knocked down in HeLa cells
 
Contributor(s) Hug N, Longman D, Aitken S, Raab M, Armes H, Mann AR, Rio-Machin A, Fitzgibbon J, Rouault-Pierre K, Caceres JF
Citation(s) 35768279
Submission date May 27, 2022
Last update date Aug 25, 2022
Contact name Javier Caceres
E-mail(s) Javier.caceres@ed.ac.uk
Organization name University of Edinburgh
Department MRC HGU
Street address Crewe Road
City Edinburgh
ZIP/Postal code EH4 2XU
Country United Kingdom
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (6)
GSM6203673 HeLa DHX34-1
GSM6203674 HeLa DHX34-2
GSM6203676 HeLa DHX34-3
This SubSeries is part of SuperSeries:
GSE204987 A dual role for the RNA helicase DHX34 in NMD and pre-mRNA splicing and its role in familial AML/MDS
Relations
BioProject PRJNA843033

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE204983_HeLa_sleuth.csv.gz 239.2 Kb (ftp)(http) CSV
GSE204983_HeLa_suppa2.csv.gz 26.8 Kb (ftp)(http) CSV
GSE204983_RAW.tar 15.0 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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