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Series GSE202217 Query DataSets for GSE202217
Status Public on Jul 05, 2022
Title Neurodevelopmental ATM deficiency affects glutamatergic transmission through KCC2-KARs expression in the hippocampus but not in the cortex
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Interest in the function of ataxia-telangiectasia mutated protein (ATM) is extensively growing as evidenced by preclinical studies which continuously associate ATM loss with new intracellular pathways. To further investigate ATM involvement in neurotransmission, we initially exploited ATM+/- and ATM-/- mice. ATM defective animals display cognitive defects rescued by the delivery of the antidepressant Fluoxetine (Fluox). Prenatal Fluox increases levels of the chloride intruder NKCC1, previously described lowered in ATM defective mice. Surprisingly, this result occurs exclusively at hippocampal level suggesting an ATM context-specificity. Indeed, a deeper investigation of excitatory synapses revealed increased Gluk1 and Gluk5 subunit-containing kainate receptors (KARs) levels in the hippocampus, but not cortex, of ATM+/- and ATM-/- mice. The comparable composition between wt and ATM+/- post-synapses (TIF purification) suggests a presynaptic KARs localization and in vitro and in ex vivo electrophysiology that KARs are fully active. Since KAR subunits functionally interact with the chloride cotransporter KCC2, which is highly expressed in ATM deficient mice, we blocked KCC2 activity during the development of ATM+/- cultures and found reduced KARs levels. Conversely, the transient and acute blockade of ATM kinase activity achieved by KU55933 in adults does not move similar changes as indicated by a completely different panel of deregulated genes identified in RNA-seq investigation performed on hippocampi explanted from KU mice. Our data, indicating that such alterations are developmental regulated and linked to ATM kinase activity through the KCC2 regulation, add new findings useful for a deeper understanding of ATM function in central neurons. Importantly, controlling the KCC2/NKCC1 levels, ATM affects both the GABAergic and glutamatergic system in the hippocampus.
 
Overall design Hippocampal RNAs from mice intranasally treated with the ATM kinase blocker KU55933 (n=4) or vehicle (4% DMSO in saline; n = 4). Direct comparison was performed
 
Contributor(s) Focchi E, Cambria C, Piazza S, Provenzano G, Antonucci F
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Submission date May 04, 2022
Last update date Jul 05, 2022
Contact name Silvano Piazza
E-mail(s) silvano.piazza@icgeb.org
Organization name ICGEB
Lab Computational Biology
Street address localita' Padriciano 99
City Trieste
ZIP/Postal code 34149
Country Italy
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM6106570 DMSO_rep1
GSM6106571 DMSO_rep2
GSM6106572 DMSO_rep3
Relations
BioProject PRJNA835074

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Supplementary file Size Download File type/resource
GSE202217_salmon.counts.txt.gz 2.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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