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Series GSE201815 Query DataSets for GSE201815
Status Public on Jul 01, 2022
Title Prenatal immune stress blunts microglia reactivity which impairs neurocircuitry [Adult_ATAC-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Recent studies suggested that microglia, the primary brain immune cells, can affect circuit connectivity and neuronal function. Microglia infiltrate the neuroepithelium early in embryonic development and are maintained in the brain throughout adulthood. Several maternal environmental factors, such as aberrant microbiome, immune activation, and poor nutrition, can influence prenatal brain development. Nevertheless, it is unknown how changes in the prenatal environment instruct the developmental trajectory of infiltrating microglia, which in turn affect brain development and function. Here we show that after maternal immune activation (MIA) microglia from the offspring have a long-lived decrease in immune reactivity (blunting) across the developmental trajectory. The blunted immune response was concomitant with changes in the chromatin accessibility and reduced transcription factor occupancy of the open chromatin. Single-cell RNA sequencing revealed that MIA does not induce a distinct subpopulation but rather decreases the contribution to inflammatory microglia states. Prenatal replacement of MIA microglia with physiological infiltration of naïve microglia ameliorated the immune blunting and restored a decrease in presynaptic vesicle release probability onto dopamine receptor type-two medium spiny neurons, indicating that aberrantly formed microglia due to an adverse prenatal environment impacts the long-term microglia reactivity and proper striatal circuit development.
 
Overall design ATAC-seq of FACS-sorted microglia (Cd11b+, Cd45-low, P2ry12+) from the striatum of control and maternal immune activation mice of 8- to 10-week-old mice after saline or LPS treatment.
 
Contributor(s) Hayes LN, Sawa A
Citation(s) 36171283
Submission date Apr 28, 2022
Last update date Sep 30, 2022
Contact name Lindsay N Hayes
E-mail(s) lhayes14@jhmi.edu
Organization name Johns Hopkins University
Department Neuroscience
Street address 600 North Wolfe Street, Meyer 4-136
City Baltimore
State/province Maryland
ZIP/Postal code 21287
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (23)
GSM6072085 MG_ATAC_CON_SAL_Rep1
GSM6072086 MG_ATAC_CON_SAL_Rep2
GSM6072087 MG_ATAC_CON_LPS_Rep1
This SubSeries is part of SuperSeries:
GSE201817 Prenatal immune stress blunts microglia reactivity which impairs neurocircuitry
Relations
BioProject PRJNA833102

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Supplementary file Size Download File type/resource
GSE201815_RAW.tar 26.6 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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