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Series GSE20068 Query DataSets for GSE20068
Status Public on Dec 01, 2011
Title p27 binds to promoters of multiple genes leading to their repression
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary The role of the cyclin-cdk inhibitor p27 in tumorigenesis is still a controversial matter. We demonstrate here that p27 negatively regulates transcription of a number of genes (p27-target genes) involved in key cellular functions as RNA processing, translation, respiration and cell proliferation.
 
Overall design Crosslinked chromatin from quiescent NIH3T3 cells was sonicated, incubated overnight with the rabbit anti-p27 and IgG antibodies as control
 
Contributor(s) Pippa R, Espinosa L, Gundem G, García-Escudero R, Domínguez A, Sainz C, Besson A, Pujol MJ, López-Bigas N, Paramio JM, Bachs O
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Submission date Jan 27, 2010
Last update date Dec 06, 2012
Contact name oriol bachs
E-mail(s) obachs@ub.edu, raffaellapippa@ub.edu
Phone 636574156
Fax 0034-934021907
Organization name University of Barcelona
Department Cell Biology, Immunology and Neurosciences
Street address Casanova 143
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platforms (2)
GPL4128 Agilent-014716 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 (G4490A) (Feature Number version)
GPL4129 Agilent-014717 Mouse Promoter ChIP-on-Chip Set 244K, Microarray 2 of 2 (G4490A) (Feature Number version)
Samples (4)
GSM501682 NIH3T3 quiescent IgG.1
GSM501683 NIH3T3 quiescent p27.1
GSM501684 NIH3T3 quiescent IgG.2
This SubSeries is part of SuperSeries:
GSE20069 p27Kip1 regulates transcription of genes involved in tumorigenesis
Relations
BioProject PRJNA129795

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20068_Genes_with_diff_logratio_over_2.xls.gz 13.3 Kb (ftp)(http) XLS
GSE20068_RAW.tar 176.0 Mb (http)(custom) TAR (of TXT)
GSE20068_diff_logratio_over_2.xls.gz 413.5 Kb (ftp)(http) XLS
GSE20068_fullinfo_A.txt.gz 25.9 Mb (ftp)(http) TXT
GSE20068_fullinfo_B.txt.gz 26.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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