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Series GSE199821 Query DataSets for GSE199821
Status Public on Nov 08, 2023
Title Protection of mouse by blockade to TNF-α signaling is due to inhibition against IL-17A
Organism Mus musculus
Experiment type Expression profiling by array
Summary We have previously reported that the dengue virus (DENV) type 3 P12/08 strain caused a lethal systemic infection, severe vascular leakage at terminal stage in IFN-α/β and γ receptors knockout mice (IFN-α/β/γRKO mice), and blockade of TNF-α signaling drastically protected mice. However, the detailed pathological mechanism remains unknown. Therefore, we performed transcriptome analysis of liver and intestinal specimens, which showed most clearly exhibited vascular leakage, chronologically collected from infected- IFN-α/β/γRKO mice with/without anti-TNF-α Ab treatment.
 
Overall design We applied mouse microarray to profile global gene expression of liver and small intestine of four mouse groups, DENV-3 P12/08 infected mouse Day 3 and 4 p.i. with or without anti-TNF-α Ab treatment, and mock-infected mice.
 
Contributor(s) Okuzaki D, Kurosu T
Citation(s) 37939119
Submission date Mar 30, 2022
Last update date Nov 09, 2023
Contact name Daisuke Okuzaki
E-mail(s) dokuzaki@biken.osaka-u.ac.jp
Phone +81-6-6879-4935
Organization name Osaka univ.
Department Immunology Frontier Research Center
Lab Human Immunology (Single Cell Genomics)
Street address Yamadaoka 3-1
City Suita
State/province Osaka
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (34)
GSM5987887 liver_noninfected_IgG_4d_rep1
GSM5987888 liver_noninfected_IgG_4d_rep2
GSM5987889 liver_noninfected_IgG_4d_rep3
Relations
BioProject PRJNA821544

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199821_RAW.tar 412.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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