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GEO accession:
Series GSE199805
Query DataSets for GSE199805
Status
Public on Dec 21, 2022
Title
A CpG island-encoded mechanism protects genes from premature transcription termination
Organisms
Drosophila melanogaster
;
Homo sapiens
;
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36759609
Submission date
Mar 30, 2022
Last update date
Mar 02, 2023
Contact name
Emilia Dimitrova
E-mail(s)
emilia.dimitrova@bioch.ox.ac.uk
Organization name
University of Oxford
Department
Biochemistry
Lab
Rob Klose
Street address
South Parks Road
City
Oxford
ZIP/Postal code
OX1 3QU
Country
United Kingdom
Platforms (3)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL19415
Illumina NextSeq 500 (Homo sapiens; Mus musculus)
GPL25537
Illumina NextSeq 500 (Drosophila melanogaster; Mus musculus)
Samples (124)
Less...
More...
GSM5986722
T7SET1AChIP_Rep1_0hr
GSM5986723
T7SET1AChIP_Rep1_2hr
GSM5986724
T7SET1AChIP_Rep2_0hr
GSM5986725
T7SET1AChIP_Rep2_2hr
GSM5986726
T7SET1AChIP_Rep3_0hr
GSM5986727
T7SET1AChIP_Rep3_2hr
GSM5986728
Input_T7SET1AChIP_Rep1_0hr
GSM5986729
Input_T7SET1AChIP_Rep1_2hr
GSM5986730
Input_T7SET1AChIP_Rep2_0hr
GSM5986731
Input_T7SET1AChIP_Rep2_2hr
GSM5986732
Input_T7SET1AChIP_Rep3_0hr
GSM5986733
Input_T7SET1AChIP_Rep3_2hr
GSM5986734
Z4ChIP_Rep1
GSM5986735
Z4ChIP_Rep2
GSM5986736
Z4ChIP_Rep3
GSM5986737
INPUT_Z4ChIP_Rep1
GSM5986738
INPUT_Z4ChIP_Rep2
GSM5986739
INPUT_Z4ChIP_Rep3
GSM5986740
NTDChIP_Rep1_0hr
GSM5986741
NTDChIP_Rep1_2hr
GSM5986742
NTDChIP_Rep2_0hr
GSM5986743
NTDChIP_Rep2_2hr
GSM5986744
NTDChIP_Rep3_0hr
GSM5986745
NTDChIP_Rep3_2hr
GSM5986746
INPUT_NTDChIP_Rep1_0hr
GSM5986747
INPUT_NTDChIP_Rep1_2hr
GSM5986748
INPUT_NTDChIP_Rep2_0hr
GSM5986749
INPUT_NTDChIP_Rep2_2hr
GSM5986750
INPUT_NTDChIP_Rep3_0hr
GSM5986751
INPUT_NTDChIP_Rep3_2hr
GSM5986752
H3K4ChIP_Rep1_0hr
GSM5986753
H3K4ChIP_Rep1_2hr
GSM5986754
H3K4ChIP_Rep1_4hr
GSM5986755
H3K4ChIP_Rep1_24hr
GSM5986756
H3K4ChIP_Rep2_0hr
GSM5986757
H3K4ChIP_Rep2_2hr
GSM5986758
H3K4ChIP_Rep2_4hr
GSM5986759
H3K4ChIP_Rep2_24hr
GSM5986760
H3K4ChIP_Rep3_0hr
GSM5986761
H3K4ChIP_Rep3_2hr
GSM5986762
H3K4ChIP_Rep3_4hr
GSM5986763
H3K4ChIP_Rep3_24hr
GSM5986764
Input_H3K4ChIP_Rep1_0hr
GSM5986765
Input_H3K4ChIP_Rep1_2hr
GSM5986766
Input_H3K4ChIP_Rep1_4hr
GSM5986767
Input_H3K4ChIP_Rep1_24hr
GSM5986768
Input_H3K4ChIP_Rep2_0hr
GSM5986769
Input_H3K4ChIP_Rep2_2hr
GSM5986770
Input_H3K4ChIP_Rep2_4hr
GSM5986771
Input_H3K4ChIP_Rep2_24hr
GSM5986772
Input_H3K4ChIP_Rep3_0hr
GSM5986773
Input_H3K4ChIP_Rep3_2hr
GSM5986774
Input_H3K4ChIP_Rep3_4hr
GSM5986775
Input_H3K4ChIP_Rep3_24hr
GSM5986796
WT_RNAseq_Rep1_0hr
GSM5986797
WT_RNAseq_Rep1_2hr
GSM5986798
WT_RNAseq_Rep2_0hr
GSM5986799
WT_RNAseq_Rep2_2hr
GSM5986800
WT_RNAseq_Rep3_0hr
GSM5986801
WT_RNAseq_Rep3_2hr
GSM5986802
dTAGSET1B_RNAseq_Rep1_0hr
GSM5986803
dTAGSET1B_RNAseq_Rep1_2hr
GSM5986804
dTAGSET1B_RNAseq_Rep1_4hr
GSM5986805
dTAGSET1B_RNAseq_Rep1_24hr
GSM5986806
dTAGSET1B_RNAseq_Rep2_0hr
GSM5986807
dTAGSET1B_RNAseq_Rep2_2hr
GSM5986808
dTAGSET1B_RNAseq_Rep2_4hr
GSM5986809
dTAGSET1B_RNAseq_Rep2_24hr
GSM5986810
dTAGSET1B_RNAseq_Rep3_0hr
GSM5986811
dTAGSET1B_RNAseq_Rep3_2hr
GSM5986812
dTAGSET1B_RNAseq_Rep3_4hr
GSM5986813
dTAGSET1B_RNAseq_Rep3_24hr
GSM5986814
dTAGSET1B_RNAseq_Rep4_0hr
GSM5986815
dTAGSET1B_RNAseq_Rep4_2hr
GSM5986816
dTAGSET1B_RNAseq_Rep4_4hr
GSM5986817
dTAGSET1B_RNAseq_Rep4_24hr
GSM5986818
dTAGSET1A_RNAseq_Rep1_0hr
GSM5986819
dTAGSET1A_RNAseq_Rep1_2hr
GSM5986820
dTAGSET1A_RNAseq_Rep1_4hr
GSM5986821
dTAGSET1A_RNAseq_Rep1_24hr
GSM5986822
dTAGSET1A_RNAseq_Rep2_0hr
GSM5986823
dTAGSET1A_RNAseq_Rep2_2hr
GSM5986824
dTAGSET1A_RNAseq_Rep2_4hr
GSM5986825
dTAGSET1A_RNAseq_Rep2_24hr
GSM5986826
dTAGSET1A_RNAseq_Rep3_0hr
GSM5986827
dTAGSET1A_RNAseq_Rep3_2hr
GSM5986828
dTAGSET1A_RNAseq_Rep3_4hr
GSM5986829
dTAGSET1A_RNAseq_Rep3_24hr
GSM5986830
dTAGSET1AB_RNAseq_Rep1_0hr
GSM5986831
dTAGSET1AB_RNAseq_Rep1_2hr
GSM5986832
dTAGSET1AB_RNAseq_Rep1_4hr
GSM5986833
dTAGSET1AB_RNAseq_Rep1_24hr
GSM5986834
dTAGSET1AB_RNAseq_Rep2_0hr
GSM5986835
dTAGSET1AB_RNAseq_Rep2_2hr
GSM5986836
dTAGSET1AB_RNAseq_Rep2_4hr
GSM5986837
dTAGSET1AB_RNAseq_Rep2_24hr
GSM5986838
dTAGSET1AB_RNAseq_Rep3_0hr
GSM5986839
dTAGSET1AB_RNAseq_Rep3_2hr
GSM5986840
dTAGSET1AB_RNAseq_Rep3_4hr
GSM5986841
dTAGSET1AB_RNAseq_Rep3_24hr
GSM5986842
dTAGSET1AB_TTseq_Rep1_0hr
GSM5986843
dTAGSET1AB_TTseq_Rep1_2hr
GSM5986844
dTAGSET1AB_TTseq_Rep2_0hr
GSM5986845
dTAGSET1AB_TTseq_Rep2_2hr
GSM5986846
dTAGSET1AB_TTseq_Rep3_0hr
GSM5986847
dTAGSET1AB_TTseq_Rep3_2hr
GSM5986848
dTAGZ4_TTseq_Rep1_0hr
GSM5986849
dTAGZ4_TTseq_Rep1_2hr
GSM5986850
dTAGZ4_TTseq_Rep2_0hr
GSM5986851
dTAGZ4_TTseq_Rep2_2hr
GSM5986852
dTAGZ4_TTseq_Rep3_0hr
GSM5986853
dTAGZ4_TTseq_Rep3_2hr
GSM5986854
dTAGSET1AB_ZC3H4_TTseq_Rep1_0hr
GSM5986855
dTAGSET1AB_ZC3H4_TTseq_Rep1_2hr
GSM5986856
dTAGSET1AB_ZC3H4_TTseq_Rep2_0hr
GSM5986857
dTAGSET1AB_ZC3H4_TTseq_Rep2_2hr
GSM5986858
dTAGSET1AB_ZC3H4_TTseq_Rep3_0hr
GSM5986859
dTAGSET1AB_ZC3H4_TTseq_Rep3_2hr
GSM6690438
Z4ChIP_Rep1_2hr
GSM6690439
Z4ChIP_Rep2_2hr
GSM6690440
Z4ChIP_Rep3_2hr
GSM6690441
INPUT_Z4ChIP_Rep1_2hr
GSM6690442
INPUT_Z4ChIP_Rep2_2hr
GSM6690443
INPUT_Z4ChIP_Rep3_2hr
This SuperSeries is composed of the following SubSeries:
GSE199801
A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq]
GSE199803
A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_RNAseq]
GSE199804
A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_TTseq]
Relations
BioProject
PRJNA821511
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