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Series GSE199593 Query DataSets for GSE199593
Status Public on Mar 28, 2022
Title Transcriptomic analysis of rsp deficient Staphylococcus aureus
Organism Staphylococcus aureus
Experiment type Expression profiling by high throughput sequencing
Summary We provide the transcriptomic profile of rsp deficient Staphylococcus aureus in order to elucidate the impact upon virulence.
 
Overall design S. aureus RNA was extracted to compare global gene expression of two samples: HOU wildtype and HOU rsp transposon mutant. HOU wildtype serves as the parental control strain. Each sample was generated by pooling three independent biological replicate RNA preps.
 
Contributor(s) Tomlinson BR, Kennedy SJ, Shaw LN
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Submission date Mar 28, 2022
Last update date Mar 28, 2022
Contact name Lindsey N Shaw
Organization name University of South Florida
Department CMMB
Street address 4202 E Fowler Avenue
City Tampa
State/province FL
ZIP/Postal code 33620
Country USA
 
Platforms (1)
GPL28116 NextSeq 550 (Staphylococcus aureus)
Samples (2)
GSM5975788 HOU_WT
GSM5975789 HOU_rsp
Relations
BioProject PRJNA820775

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199593_HOU-WT-rsp_expression.xlsx 105.8 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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