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Series GSE199166 Query DataSets for GSE199166
Status Public on Dec 18, 2022
Title Stress signaling boosts interferon-induced gene transcription in macrophages
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://www.science.org/doi/10.1126/scisignal.abq5389?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
 
Citation(s) 36512641
Submission date Mar 22, 2022
Last update date Mar 20, 2023
Contact name Laura Boccuni
E-mail(s) laura.boccuni@univie.ac.at
Organization name University of Vienna
Department Department of Microbiology, Immunobiology and Genetics
Street address Dr-Bohr-Gasse, 9
City Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (2)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (90)
GSM5964743 UT rep1 (ATAC-seq_IFNb)
GSM5964744 An rep1 (ATAC-seq_IFNb)
GSM5964745 IFNb rep1 (ATAC-seq_IFNb)
This SuperSeries is composed of the following SubSeries:
GSE199125 Chromatin accessibility analysis of wild type bone marrow-derived macrophages in response to Anisomycin, type I interferons and the combination of them or with p38 MAPK inhibitor PH-797804 (ATAC-Seq IFNb)
GSE199126 Chromatin accessibility analysis of wild type bone marrow-derived macrophages in response to Anisomycin, type II interferon and the combination of them or with p38 MAPK inhibitor PH-797804 (ATAC-Seq IFNg)
GSE199127 c-Jun and CREB1 transcription factor binding analysis in wild type bone marrow-derived macrophages in response to type II interferon and stress
Relations
BioProject PRJNA818676

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199166_RAW.tar 965.6 Mb (http)(custom) TAR (of BW, NARROWPEAK)
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