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Series GSE198410 Query DataSets for GSE198410
Status Public on Mar 16, 2022
Title Transcriptomics and phenotyping define signatures associated with echinocandin resistance in Candida auris
Organism [Candida] auris
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptomic analysis of different Candida auris clinical isolates
Overall design RNA Sequencing was performed of 5 Candida auris clinical isolates. Cells were grown to the exponential phase in YPD at 30oC. Cultures were harvested and three biological replicates were subjected for RNA isolation and sequencing library preparation.
Contributor(s) Jenull S, Shivarathri R, Kuchler K, Chauhan N
Citation(s) 35968956
Submission date Mar 11, 2022
Last update date Sep 15, 2022
Contact name Sabrina Jenull
Organization name Max Perutz Labs
Lab Kuchler
Street address Dr. Bohrgasse 9/2
City Vienna
ZIP/Postal code 1030
Country Austria
Platforms (1)
GPL28368 Illumina NovaSeq 6000 ([Candida] auris)
Samples (15)
GSM5946376 1184/P/13-R_R1
GSM5946377 1184/P/13-R_R2
GSM5946378 1184/P/13-R_R3
BioProject PRJNA814991

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198410_raw_counts.txt.gz 176.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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