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Series GSE198182 Query DataSets for GSE198182
Status Public on Jan 20, 2023
Title A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://pubmed.ncbi.nlm.nih.gov/36736317/
 
Citation(s) 36736317
Submission date Mar 09, 2022
Last update date Apr 24, 2023
Contact name Maximilian Christian von der Linde
E-mail(s) maximilian.linde@imp.ac.at, max_vdl@outlook.com
Phone +4368181646556
Organization name Institute of Molecular Pathology
Lab Pavri GRP
Street address Campus-vienna-biocenter 1, IMP, Pavri GRP
City Vienna
State/province Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (69)
GSM5940109 priB_Rad21_ChIPseq_control
GSM5940110 priB_Rad21_ChIPseq_Spt5depleted
GSM5940135 priB_TriC_B18AIDKO_Emucapture_0h_rep1+3
This SuperSeries is composed of the following SubSeries:
GSE198176 A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [ChIP-Seq]
GSE198179 A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [Tri-C]
GSE198180 A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [PRO-seq]
Relations
BioProject PRJNA814063

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198182_RAW.tar 6.5 Gb (http)(custom) TAR (of BW, MCOOL, TAB)
SRA Run SelectorHelp
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