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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 01, 2024 |
| Title |
TGF-β specifies TFH versus TH17 cell fates in murine CD4+ T cells through c-Maf (Seq04, scRNA-seq) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Naive murine CD4+ T cells were cultured under different polarizing conditions in 96-well plates coated with anti-CD3/anti-CD28 for 0, 0.5, 1.5, 3.5 days, sorted by flow cytometry, and subjected to single-cell RNA-seq.
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| Overall design |
Seq04: scRNA-seq: Tfh(2)d0, Tfh(2)d0.5, Tfh(2)d1.5, Tfh(2)d3.5
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| Web link |
https://www.science.org/doi/10.1126/sciimmunol.add4818
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| Contributor(s) |
Baumjohann D, Chang Y |
| Citation(s) |
38427718 |
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| Submission date |
Mar 03, 2022 |
| Last update date |
Mar 04, 2024 |
| Contact name |
Dirk Baumjohann |
| E-mail(s) |
dirk.baumjohann@uni-bonn.de
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| Organization name |
University Hospital Bonn
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| Department |
Medical Clinic III
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| Lab |
Baumjohann Lab
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| Street address |
Venusberg-Campus 1
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| City |
Bonn |
| State/province |
NRW |
| ZIP/Postal code |
53127 |
| Country |
Germany |
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| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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| Samples (1) |
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| Relations |
| BioProject |
PRJNA812500 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE197842_RAW.tar |
81.5 Mb |
(http)(custom) |
TAR (of MTX, TSV) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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