|
| Status |
Public on Feb 22, 2023 |
| Title |
shox2 is required for inner ear development |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Zebrafish tissue around the inner ear was dissected from wild-type, heterozygote and mutant ~16-22 hpf embryos and subjected to single cell RNAseq
|
| |
|
| Overall design |
Single cell RNAseq was compared for WT, shox2 heterozygotes and shox2 homozygote mutants.
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| |
|
| Contributor(s) |
Kwan KY, Laureano A |
| Citation(s) |
36594417 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 DC015000 |
Molecular Mechanisms of Chromatin Remodeling Proteins in Alzheimers Disease |
RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY |
KELVIN YUI-HANG KWAN |
| F31 DC016239 |
Role of shox2 in zebrafish otic neuron development |
RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY |
Alejandra Sofia Laureano Ruiz |
|
| |
| Submission date |
Feb 23, 2022 |
| Last update date |
May 24, 2023 |
| Contact name |
Kelvin Y. Kwan |
| E-mail(s) |
kelvin.kwan@rutgers.edu
|
| Phone |
8484451781
|
| Organization name |
Rutgers University
|
| Department |
Cell Biology & Neuroscience
|
| Street address |
604 Allison Rd.
|
| City |
Piscataway |
| State/province |
NJ |
| ZIP/Postal code |
08854 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21741 |
Illumina HiSeq 4000 (Danio rerio) |
|
| Samples (3) |
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| Relations |
| BioProject |
PRJNA809651 |
