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Series GSE196863 Query DataSets for GSE196863
Status Public on Feb 23, 2023
Title p53 ChIP-seq of primary astrocytes in vitro
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To investigate the transcriptional regulation by p53 in astrocytes, we performed ChIP-sequencing using p53 antibody (Leica CM-5) or rabbit IgG control in wildtype primary mouse cortical astrocytes.
 
Overall design Primary astrocytes from a total of 8 P3 mouse brains were cultured in the presence of BMP4. ChIP was performed using the EZ-Magna ChIP kit (Millipore) according to manufacturers instructions.
Web link https://doi.org/10.1016/j.cub.2023.02.013
 
Contributor(s) Parrinello S, Marguerat S
Citation(s) 36841240
Submission date Feb 16, 2022
Last update date Mar 28, 2023
Contact name Simona Parrinello
Organization name UCL Cancer Institute
Street address 72 Huntley Street
City London
ZIP/Postal code WC1E 6DD
Country United Kingdom
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (2)
GSM5903322 Primary mouse astrocytes - Input
GSM5903323 Primary mouse astrocytes - p53 ChIP
Relations
BioProject PRJNA807631

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196863_RAW.tar 313.7 Mb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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