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Series GSE195647 Query DataSets for GSE195647
Status Public on Apr 02, 2024
Title Progressive Senescence Programs Elicit Intrinsic Vulnerability to Ageing-related Cancer
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Cancer incidence escalates exponentially with advancing age, the mechanism of which remains obscure. Here we built up a chronological molecular clock at the single cell level for the mammary stem cell enriched population to depict the physiological ageing dynamics. We found the mammary ageing process was asynchronous and progressive, determined by the relative proportions of four distinct cellular states. The mammary ageing was initiated by a light senescence state with elevated NFkb, P53 signals, followed by a deep senescence state with reduced NFkb, P53 and enhanced PI3K-Akt-mTOR, Wnt, Notch and pluripotency activities succumb to cancer predisposition. Both of these senescence programs were regulated by a master mammary stem cell factor Bcl11b through modulation of multiple stress, longevity and pluripotency associated pathways. Depletion of Bcl11b triggered morphological, functional and molecular ageing-like phenotypes, and drastically enhanced DMBA-induced tumor formation. We further screened out a drug TPCA-1 that can elevate Bcl11b activity, rejuvenate mammary cells transcriptomically and significantly reduce the ageing-related cancer incidence. Our findings established a molecular portrait of progressive mammary cell ageing and elucidated the regulatory network bridging mammary ageing and cancer predisposition that can be modulated to control the cancer initiation, which has potential implications in management of cancer prevalence.
 
Overall design Single cell RNA profiles of mammary gland basal cells from different age, Bcl11b ko mice and mammary gland tumor
Web link https://www.nature.com/articles/s41467-024-49106-2
 
Contributor(s) Bai H, Liu X, Lin M, Meng Y, Tang R, Guo Y, Li N, F.Clarke M, Cai S
Citation(s) 38886378
Submission date Jan 28, 2022
Last update date Jun 18, 2024
Contact name Shang Cai
E-mail(s) caishang@westlake.edu.cn
Organization name Westlake University
Department School of Life Science
Lab Stem Cell and Cancer Laboratory
Street address Shilongshan Road No.18, Cloud Town, Xihu District
City HangZhou
State/province ZheJiang
ZIP/Postal code 310013
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (43)
GSM5842316 m2_v1
GSM5842317 m2_v2
GSM5842318 m4_v2
Relations
BioProject PRJNA801627

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Supplementary file Size Download File type/resource
GSE195647_Barcode.txt.gz 662 b (ftp)(http) TXT
GSE195647_RAW.tar 14.7 Mb (http)(custom) TAR (of TSV)
GSE195647_bclrb12_IgG12_peaks.narrowPeak.gz 22.7 Kb (ftp)(http) NARROWPEAK
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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