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Series GSE19416 Query DataSets for GSE19416
Status Public on Mar 04, 2010
Title Genome-wide copy number variation in TP53 mutation negative ovarian tumours
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Genome-wide copy number variation was measured in TP53 mutation negative ovarian tumours. Analysis described in "Driver mutations in TP53 are ubiquitous in high grade serous carcinoma of the ovary" (Ahmed et al., 2010)
Overall design 7 needle-dissected or whole tumours (>80% tumour content) were analysed by Affymetrix SNP 6.0 Microarrays
Contributor(s) Ahmed AA, Etemadmoghadam D, Temple J, Lynch AG, Riad M, Sharma R, Stewart C, Fereday S, Caldas C, DeFazio A, Bowtell D, Brenton JD
Citation(s) 20229506
Submission date Dec 10, 2009
Last update date Nov 27, 2018
Contact name Dariush Etemadmoghadam
Phone 61396561149
Organization name Peter MacCallum Cancer Centre
Street address St Andrew's Place
City East Melbourne
ZIP/Postal code 3002
Country Australia
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (7)
GSM482789 533
GSM482790 22029
GSM482791 23221
BioProject PRJNA121733

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19416_RAW.tar 196.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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