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Series GSE193407 Query DataSets for GSE193407
Status Public on Mar 15, 2023
Title CTE RNASeq association with APOE and TMEM
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary CTE RNASeq association with APOE and TMEM. It is known that APOE is a risk factor of CTE. This study will look at differences between CTE stages - mild and severe, including associations with age, APOE and TMEM.
Overall design 136 samples were analyzed, 58 control samples, 17 mild CTE samples, and 61 severe CTE samples
Contributor(s) Stein T, Labadorf A
Citation(s) 36895005
Submission date Jan 10, 2022
Last update date Mar 15, 2023
Contact name Adam Labadorf
Organization name Boston University Medical School
Department Neurology
Street address 72 East Concord Street E301
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (136)
GSM5799646 ST_AN_K-310
GSM5799647 ST_AN_K-312
GSM5799648 ST_AN_K-316
BioProject PRJNA796038

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193407_CTEII_all_sample_info.csv.gz 3.2 Kb (ftp)(http) CSV
GSE193407_all_CTE_RNASeq_htseq_counts.csv.gz 7.1 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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